The Scyllarus Hyperspectral ZIP (HSZ) file format is a comprehensive format for Hyperspectral Images, based on the HDF5 file structure.


  • Compressed –  storing image components (Reflectance, Specularity and Diffuse components) allowing for reconstruction of original data;
  • Fast – images with many multispectral wavelength bands can be written and read quickly;
  • Transportable – the HDF5 format can be read on a variety of platforms, including Windows, Linux and Mac, and by a variety of different software packages;
  • Comprehensive – storing the Scyllarus processed Reflectance, Highlight and Shading layers along with the material analysis results;
  • Open – the Scyllarus C++ API can be used to read and write this format from any program;
  • Suitable for Research – the Scyllarus MATLAB® Toolbox can read and write this format.

How it works

When Scyllarus processes a Hyperspectral image, it is broken down into several components – the basic image components that combine to make the final image based upon the dichromatic model  (Finlayson & Schaefer, 2001).

The following equation describes the modified dichromatic model (For a given wavelength λ and a given pixel u) used by Scyllarus:

dichromatic model

In the above equation, I is the Image Cube. The other components are as follows:

  • L is the Illuminant power spectrum (a vector);
  • g is the shading factor (a matrix);
  • S is the Reflectance (a cube);
  • K and k are the specular coefficient and factor (a cube + matrix).

Each of the above elements is stored within the hierarchical HSZ file, as its own field. The tool ‘HDF View‘ allows you to inspect a HSZ file and view its contents as raw data. The S component of the image is further decomposed by storing each pixel as a combination of a number of ‘materials’.

By storing the data in this way, the sum storage space required by the components of the original ‘I’ is less than its initial size. The level of compression can be adjusted by varying the number of materials combined to recreate each pixel. Storing an image in HSZ format does result in some minor losses of information, thought in most cases the reconstructed image has below 1% difference to the original.

More Information

You can download the detailed HSZ format specification document here.